A hydrophobic ammonia-oxidizing archaeon of the Nitrosocosmicus clade isolated from coal tar-contaminated sediment

Autor(en)
Man-Young Jung, Jong-Geol Kim, Jaap S Sinninghe Damsté, W Irene C Rijpstra, Eugene L Madsen, So-Jeong Kim, Heeji Hong, Ok-Ja Si, Melina Kerou, Christa Schleper, Sung-Keun Rhee
Abstrakt

A wide diversity of ammonia-oxidizing archaea (AOA) within the phylum Thaumarchaeota exists and plays a key role in the N cycle in a variety of habitats. In this study, we isolated and characterized an ammonia-oxidizing archaeon, strain MY3, from a coal tar-contaminated sediment. Phylogenetically, strain MY3 falls in clade 'Nitrosocosmicus' of the thaumarchaeotal group I.1b. The cells of strain MY3 are large 'walnut-like' cocci, divide by binary fission along a central cingulum, and form aggregates. Strain MY3 is mesophilic and neutrophilic. An assay of (13) C-bicarbonate incorporation into archaeal membrane lipids indicated that strain MY3 is capable of autotrophy. In contrast to some other AOA, TCA cycle intermediates, i.e. pruvate, oxaloacetate and α-ketoglutarate, did not affect the growth rates and yields of strain MY3. The attachment of cells of strain MY3 to XAD-7 hydrophobic beads and to the adsorbent vermiculite demonstrated the potential of strain MY3 to form biofilms. The cell surface was confirmed to be hydrophobic by the extraction of strain MY3 from an aqueous medium with p-xylene. Our finding of a strong potential for surface attachment by strain MY3 may reflect an adaptation to the selective pressures in hydrophobic terrestrial environments.

Organisation(en)
Department für Ökogenomik und Systembiologie
Journal
Environmental Microbiology Reports
Band
8
Seiten
983-992
Anzahl der Seiten
10
ISSN
1758-2229
DOI
https://doi.org/10.1111/1758-2229.12477
Publikationsdatum
12-2016
Publikationsstatus
Veröffentlicht
Peer-reviewed
Ja
ÖFOS 2012
106022 Mikrobiologie
Link zum Portal
https://ucris.univie.ac.at/portal/de/publications/a-hydrophobic-ammoniaoxidizing-archaeon-of-the-nitrosocosmicus-clade-isolated-from-coal-tarcontaminated-sediment(39bb95d6-369d-4516-9897-4991b2c6aa59).html